Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842217.1_cds_XP_016508300.1_21336
CDS Infomation

[gene=LOC107825898] [db_xref=GeneID:107825898] [protein=protein OBERON 4-like] [protein_id=XP_016508300.1] [location=join(3727..6628,8041..8615)] [gbkey=CDS]
Sequence

ATGAAGAGATTGAGGTCTAGTGAAGATCTTGAGTCATGTGGGGAGAAAGGTGTGTTGAAA
GATTGGGCAAGAAGGGAGGAGGATCCGAGTTTACATCGCTCATCTTCCCACAGGAGCTTT
TATTACAAGTCTGAGAGTGGGAGAAAGGGACTATCTTCGTCGTCGTCTAGGTATGACCGG
TTTGAGGATGACCGTGAGAGTCTGAGACCGATAAAGAAGCGGACAGATTATGATGTGGAC
AGCTATGATAGGCGGAAGAGTTACGATCGGTACAGTCATAGTAATGATAGAGGGGTTCTG
AACTCTTCTCCACGGGGTGGATACGGTGGTGATCGGATTCATAGGTCAGAAAGTTTTTCT
GGCCCAAGGAGGGAATTCCCTAAGGGGTTTAGATCAGAGAGGGATAGGTCCAGGCGAGAG
GGGAGTGTGTCATCATGGCGGAGGTTTGGTGGCGGGAAAGATGGTGATGAAGGCACAAGG
AGTGGTGGAGATTCAGCAAGAGGAAGTAGAACAGAATCAGAAGATATTGGGAAGGCAAAG
TCACCGCCGGGATGGAGAGATGCAAGATCACCTGCTTGGTCAAAGGACTCTGGTAGCGAG
CAATCAAGGAGTGTTGAAGTTAAAAGAAGTGACGCCTTGCCAATGGGCAGTGGTGGACAT
AGCAGTGAAATGGAAGAAGGGGAACTGGAGCCTGATCTTCCGTCTTCTGCGGCTGAGCCT
GCAGCTGAAGATGAAGCTTCCGGTGAGATTAATCCCTCACAGAAGGAGAATGAGAGGCGA
GATGATGGGGTGAATTCCTTGTACGAACAGAAGGTTGAGCTCAGTAAAGTAAGTGTTACT
GCCGAGCAGTCGGAAGAGACACAGTCGGATAATGTCCGAGACATTTTCAAGGACAGTGAT
GGCTTGTCTGATAATCAAGGCACTTCAATGGGGCCTAGTGGCATGGGAAATGGAACTGAA
ACCGTGGTAGATCATGTTGGTGAAAAGAATGAGTCCACCAGGAAAAGCAGTAGTGGGGAA
GAAGAAAAGAATATAGATGCCGAGAAGCTACCACCTAAGAAAAGGGAACAAGTGGAGGAC
AAGAGCAGAGATGTTGAATCTAAGGTAAATCGTATTGATGTTCACGAATTAAATAGGGAA
ATTGCTGGGGAAGCTGGACCGCCGGGCTCTGTTTCTTCTGTTGCACATGAAGATGTATCA
CAGAGTGTCCAGGACAAGGGCAAAAGTGTGGCTGTTTCGCCTGGTAATAACACTGTCCCT
CCTGCAGATGGTTTGAGGATGGAAAACGAGTCAAGAGGCTTTGTACCTTGTGGAAACTCT
GATATGGAAGGACCAAGTACCAGGGGTCTTGAGTTGTTCTTGTCAGGTCCTGTCAAAAAA
CCTGAGAAAGTAGAGAAATTTAGTAATTCCATGACCAAAGATGAAAAGTTTGGTCTGGAA
CCACTTGAGCTTTCTCTTAGCTTGCCAAATGTCCTGTTGCCTATTGGTGCACAGAAAGAA
GTCCAGCCTCCTGGTTCTCCTAGTCAAGGAAGGAGTTTTCAATCCTTTGCCAGCTCATTT
CACACAAATTCTGATGGCTTTACCATGTCTATGTCCTTTTCAGGATCACAACACTTCACT
CATAATCCTAGCTGCTCACTGACACATAATTTAGTTGATAATGAGCAATCTGTTAAAAGT
CGCCCCCTCTTTCAAGGTGTCGATTGGCAAGCCCTTGCTTCGAATGAGCAGAAGAATAAT
GACATCCCAGGTTGTCAAGGCATAATATTATCAAATGGAACTGGATTGTATCAGCAGTCT
CAAGGAAATTCTAGTGGTCAAGCTGTAGGAGAACATCTCAGAGCTGCACAGGGAGGCTCT
AGATTGCCTGTTGGGCTAGACAGACAGCTAAGCACTGTTAAAACATCTCGTCATCCAAAT
GGAGCTAGATCTCCTACACAGAGTGTTGGGTCTCATGAAACTGGATCAGAATATAATACA
GATAAGAAACAATTAACTAGAGCTAAAGATAGTAGCTTTTATAGATTCGGTGGTTCTGAT
GGCAAAGAGCTCCCATTGGCTGTTGGAACGGACTTTGTTGAATCAGTAATCACCACCATG
GTTTCTGAACCAATACATGTGACTGCCAGGAGGTTTAATGAGATCTCAGGGCAACATTTG
CTTTGTCTGAAGGAGGCTGTCTGCGACATCATTACAAATCCTGGTAAAAACTGGCAGCTT
AGTGCTCTGCAAAAGACACTGCAGAAGAGGTCTGACATGACTTTGGATACACTATTGAAA
TCCCACAGGAGTCAACTAGAGCTGTTGGTGGCTCTGAAAACTGGTCTCCAAGAATTTCTT
CGGCAAAGTTATGATATTTCATCATCTGATTTGGCAGAGATATTTCTCAATTTAAGATGT
AGAAATCTGACTTGTCGATCTTCGTTGCCTGTGGATGAATGTGAGTGCAAAGTTTGCTCG
CAGAAGGATGGTTTCTGCAGTGCTTGCATGTGTCTTGTGTGTTCCAAGTTTGACTTGGCA
TCTAATACGTGTAGCTGGGTTGGATGTGATGTATGTCTGCATTGGTGTCACGCTGATTGT
GGGCTACGTGAATCTTACATCAGGAATGGACGTAGTGTTTCTGGTGCAAAGGGTAGTGTA
GAGATGCAGTTTCATTGTGTTGCATGTAATCATCCATCTGAAATGTTCGGCTTTGTAAAA
GAGGTTTTCCAAAACTTTGCTAAGGAATGGACCTCGGAAGCACTTTCCAGGGAGCTTGAA
TATGTGAAAAGAATTTTTTGCGCCAGCGAGGACGTCAGAGGGAAACGCTTGCATGACCTT
GCTAATTATATGCTGTCAAAATTGGCAATTAAGGCTGACCTTCAAGAAGTTCAAAGTCAA
ATTATGCATTTCTTGCTGACTGAGCCTGATTCGGTCAAATCTGACAATGTTCCAAATATT
CAAGGAAAGGAGTTGTCAACAAAGAACCACGAAGGGAACAATGGCGTTGCTCGGCCTAAC
CAGGGAGCGATGTGGCTGAAATCTGTTGGTTCAGAAAAGGTTCCTCAAGTGGAAAAGCCT
ACAGCAGGTTTGCCTTCAAGTTTTGATAGCCTCCGGAATGACAAGCAGGCGATGATCTCA
AGTTTTCAGCCAAGTATAAAAAAGGTACCAGTATTTGATGAACTAGAGAGCATTGTTAGA
ATCAAACAGGCTGAAGCCAAAATGTTCCAAGCACGAGCTGATGAAGCTAGGAGAGAGGCT
GATGCCCTGAAGCGCATTGCTGTAACAAAGAGTGAAAGAATTGAAGAAGAATACATAGCT
CGAATCACAAAACTGCGATTGACCGAGGCTGAGGAGATGCGGAAACAAAAGGTGGAAGAG
CTGCAGTCTTTAGAAAGAGCTTATCAGGACTACTTCAATATGAAAATGAGAATGGAAAAT
AACATCAAAGATCTATTGTTGAAAATGGAAGCTACTAGAAGGAATCTCAATTTGTGA

Peptide Sequence

PEP ID

XP_016508300.1
PEP Infomation

PREDICTED: protein OBERON 4-like [Nicotiana tabacum]
Sequence

MKRLRSSEDLESCGEKGVLKDWARREEDPSLHRSSSHRSFYYKSESGRKGLSSSSSRYDR
FEDDRESLRPIKKRTDYDVDSYDRRKSYDRYSHSNDRGVLNSSPRGGYGGDRIHRSESFS
GPRREFPKGFRSERDRSRREGSVSSWRRFGGGKDGDEGTRSGGDSARGSRTESEDIGKAK
SPPGWRDARSPAWSKDSGSEQSRSVEVKRSDALPMGSGGHSSEMEEGELEPDLPSSAAEP
AAEDEASGEINPSQKENERRDDGVNSLYEQKVELSKVSVTAEQSEETQSDNVRDIFKDSD
GLSDNQGTSMGPSGMGNGTETVVDHVGEKNESTRKSSSGEEEKNIDAEKLPPKKREQVED
KSRDVESKVNRIDVHELNREIAGEAGPPGSVSSVAHEDVSQSVQDKGKSVAVSPGNNTVP
PADGLRMENESRGFVPCGNSDMEGPSTRGLELFLSGPVKKPEKVEKFSNSMTKDEKFGLE
PLELSLSLPNVLLPIGAQKEVQPPGSPSQGRSFQSFASSFHTNSDGFTMSMSFSGSQHFT
HNPSCSLTHNLVDNEQSVKSRPLFQGVDWQALASNEQKNNDIPGCQGIILSNGTGLYQQS
QGNSSGQAVGEHLRAAQGGSRLPVGLDRQLSTVKTSRHPNGARSPTQSVGSHETGSEYNT
DKKQLTRAKDSSFYRFGGSDGKELPLAVGTDFVESVITTMVSEPIHVTARRFNEISGQHL
LCLKEAVCDIITNPGKNWQLSALQKTLQKRSDMTLDTLLKSHRSQLELLVALKTGLQEFL
RQSYDISSSDLAEIFLNLRCRNLTCRSSLPVDECECKVCSQKDGFCSACMCLVCSKFDLA
SNTCSWVGCDVCLHWCHADCGLRESYIRNGRSVSGAKGSVEMQFHCVACNHPSEMFGFVK
EVFQNFAKEWTSEALSRELEYVKRIFCASEDVRGKRLHDLANYMLSKLAIKADLQEVQSQ
IMHFLLTEPDSVKSDNVPNIQGKELSTKNHEGNNGVARPNQGAMWLKSVGSEKVPQVEKP
TAGLPSSFDSLRNDKQAMISSFQPSIKKVPVFDELESIVRIKQAEAKMFQARADEARREA
DALKRIAVTKSERIEEEYIARITKLRLTEAEEMRKQKVEELQSLERAYQDYFNMKMRMEN
NIKDLLLKMEATRRNLNL

Transcript Sequence

Gene sequence data has not been registered.